Phase 11-12: LLVM backend initial, semantics layer, plugin unification

Major changes:
- LLVM backend initial implementation (compiler.rs, llvm mode)
- Semantics layer integration in interpreter (operators.rs)
- Phase 12 plugin architecture revision (3-layer system)
- Builtin box removal preparation
- MIR instruction set documentation (26→Core-15 migration)
- Cross-backend testing infrastructure
- Await/nowait syntax support

New features:
- LLVM AOT compilation support (--backend llvm)
- Semantics layer for interpreter→VM flow
- Tri-backend smoke tests
- Plugin-only registry mode

Bug fixes:
- Interpreter plugin box arithmetic operations
- Branch test returns incorrect values

Documentation:
- Phase 12 README.md updated with new plugin architecture
- Removed obsolete NYIR proposals
- Added LLVM test programs documentation

Co-Authored-By: Claude <noreply@anthropic.com>

examples/semantics_test_array.nyash

@@ -0,0 +1,16 @@
+// Semantics test - Array operations
+
+static box Main {
+    main() {
+        local arr, value
+        arr = new ArrayBox()
+        
+        // ArrayGet/ArraySet test
+        arr.push(10)
+        arr.push(20)
+        arr.push(30)
+        
+        value = arr.get(1)  // Should be 20
+        return value
+    }
+}